diff --git a/app/src/main/java/com/droiddeck/launcher/session/ComponentsManager.kt b/app/src/main/java/com/droiddeck/launcher/session/ComponentsManager.kt
index d1aae9d72..d05ba2836 100644
--- a/app/src/main/java/com/droiddeck/launcher/session/ComponentsManager.kt
+++ b/app/src/main/java/com/droiddeck/launcher/session/ComponentsManager.kt
@@ -721,13 +721,19 @@ object ComponentsManager {
     class StoredOriginal(val protonId: String, val protonName: String?, val comp: String, val protonVersion: String, val size: Long, val kept: Boolean)
     class Stored(val packages: List<StoredPackage>, val originals: List<StoredOriginal>)
 
-    private fun packagesInUse(state: JSONObject): Set<String> {
+    internal fun liveSelection(key: String, entry: JSONObject, proton: Proton?): Boolean =
+        proton != null && (key == "queued" || entry.optString("protonVersion") == proton.version)
+
+    private fun packagesInUse(state: JSONObject, installed: Map<String, Proton>): Set<String> {
         val names = HashSet<String>()
         for (key in listOf("active", "queued")) {
             val byProton = state.optJSONObject(key) ?: continue
             for (pid in byProton.keys()) {
                 val comps = byProton.optJSONObject(pid) ?: continue
-                for (comp in comps.keys()) comps.optJSONObject(comp)?.optString("file")?.takeIf { it.isNotEmpty() }?.let(names::add)
+                for (comp in comps.keys()) {
+                    val entry = comps.optJSONObject(comp) ?: continue
+                    if (liveSelection(key, entry, installed[pid])) entry.optString("file").takeIf { it.isNotEmpty() }?.let(names::add)
+                }
             }
         }
         val profiles = state.optJSONObject("profiles")
@@ -747,8 +753,8 @@ object ComponentsManager {
 
     fun stored(context: Context): Stored = synchronized(lock) {
         val state = loadState(context)
-        val used = packagesInUse(state)
         val installed = protons(context).associateBy { it.id }
+        val used = packagesInUse(state, installed)
         val originals = originalsDir(context).listFiles()?.filter { it.isDirectory }?.flatMap { proton ->
             proton.listFiles()?.filter { it.isDirectory }?.flatMap { version ->
                 COMPONENTS.mapNotNull { comp ->
@@ -777,23 +783,35 @@ object ComponentsManager {
     fun deletePackage(context: Context, file: String): String = synchronized(lock) {
         val name = safeName(file)
         val state = loadState(context)
-        val queued = state.sub("queued")
-        for (pid in queued.keys()) {
-            val comps = queued.optJSONObject(pid) ?: continue
-            for (comp in comps.keys()) check(comps.optJSONObject(comp)?.optString("file") != name) { context.getString(R.string.cmgr_package_in_use, name, pid) }
-        }
-        val active = state.sub("active")
-        for (pid in active.keys()) {
-            val comps = active.optJSONObject(pid) ?: continue
-            for (comp in comps.keys()) check(comps.optJSONObject(comp)?.optString("file") != name) { context.getString(R.string.cmgr_package_in_use, name, pid) }
-        }
-        val profiles = state.sub("profiles")
-        for (scope in profiles.keys()) {
-            val profile = profiles.optJSONObject(scope) ?: continue
-            check(COMPONENTS.none { profile.optString(it) == name }) { context.getString(R.string.cmgr_package_in_use, name, scope) }
+        val installed = protons(context).associateBy { it.id }
+        var changed = false
+        for (key in listOf("queued", "active")) {
+            val byProton = state.sub(key)
+            for (pid in byProton.keys().asSequence().toList()) {
+                val comps = byProton.optJSONObject(pid) ?: continue
+                for (comp in comps.keys().asSequence().toList()) {
+                    val entry = comps.optJSONObject(comp) ?: continue
+                    if (entry.optString("file") != name) continue
+                    check(!liveSelection(key, entry, installed[pid])) { context.getString(R.string.cmgr_package_in_use, name, installed[pid]?.name ?: pid) }
+                    comps.remove(comp)
+                    changed = true
+                }
+                if (comps.length() == 0) byProton.remove(pid)
+            }
         }
         val f = File(packagesDir(context), name)
         check(f.isFile) { context.getString(R.string.cmgr_package_not_stored, name) }
+        val profiles = state.sub("profiles")
+        for (scope in profiles.keys().asSequence().toList()) {
+            val profile = profiles.optJSONObject(scope) ?: continue
+            for (comp in COMPONENTS.filter { profile.optString(it) == name }) {
+                rememberProfiledComponent(state, comp)
+                profile.remove(comp)
+                changed = true
+            }
+            if (profile.length() == 0) profiles.remove(scope)
+        }
+        if (changed) saveState(context, state)
         f.delete()
         context.getString(R.string.cmgr_deleted, name)
     }
diff --git a/app/src/test/java/com/droiddeck/launcher/session/ComponentsSelectionTest.kt b/app/src/test/java/com/droiddeck/launcher/session/ComponentsSelectionTest.kt
new file mode 100644
index 000000000..517d6ad2b
--- /dev/null
+++ b/app/src/test/java/com/droiddeck/launcher/session/ComponentsSelectionTest.kt
@@ -0,0 +1,32 @@
+package com.droiddeck.launcher.session
+
+import org.json.JSONObject
+import org.junit.Assert.assertFalse
+import org.junit.Assert.assertTrue
+import org.junit.Test
+import org.junit.runner.RunWith
+import org.robolectric.RobolectricTestRunner
+import java.io.File
+
+@RunWith(RobolectricTestRunner::class)
+class ComponentsSelectionTest {
+    private val proton = ComponentsManager.Proton("DroidDeck-Proton_11-11.1", "DroidDeck-Proton 11-11.1", File("/p"), "/p", "DroidDeck-Proton-11-11.1", false)
+    private val entry = JSONObject().put("file", "dxvk-low-latency-arm64ec-3.1.1-2-linux.wcp").put("protonVersion", "DroidDeck-Proton-11-11.1")
+
+    @Test
+    fun `a package swapped into an installed Proton is in use`() {
+        assertTrue(ComponentsManager.liveSelection("active", entry, proton))
+        assertTrue(ComponentsManager.liveSelection("queued", JSONObject().put("file", "x.wcp"), proton))
+    }
+
+    @Test
+    fun `a package left on a removed Proton is not in use`() {
+        assertFalse(ComponentsManager.liveSelection("active", entry, null))
+        assertFalse(ComponentsManager.liveSelection("queued", entry, null))
+    }
+
+    @Test
+    fun `a package from before a Proton update is not in use`() {
+        assertFalse(ComponentsManager.liveSelection("active", JSONObject(entry.toString()).put("protonVersion", "DroidDeck-Proton-11-9.1"), proton))
+    }
+}